I am not currently at my work machine, but using Rhino 7.15 here at least it appears to be working fine - at least no geometry duplication in Raytraced view.
@marton.parlagh do you get geometry duplication in your Rhino copy for Raytraced?
There has been one change that possibly could impact your side, depending on how you handle things:
When a mesh with the same guid is both deleted and added then the guid is not anymore added to the deleted array. The reasoning is that the mesh already exists, but only gets changed, hence it is in the added (-OrUpdated) list.